Mark, I have the exact same door problem you do only in mirror image. My passenger door seems perfect, but my drivers door has always been a problem. The front of my door comes down first and sits lower. The rear of the door is hard to latch unless I karate-chop the door closed on the rear from outside or pull the handle down and forward from inside. I had DMC Joe adjust it last year and his son adjust it this year. It is still messed up. Alan (his son) suggested that the hinge needs adjustment. I can tell from the dings on the door & t-panel that a previous owner made a really bad attempt at a hinge adjustment, so that is probably my problem. I don't think that the problem is a twisted door. Can you say if your car has ever been wreaked? As for the door not lining up with the fender & quarter panel, experts say that a properly adjusted door is adjusted to fit the fiberglass. Then the fender & quarter panel are adjusted to align with the door. Walt Tampa, FL